BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D10SP1|AL430227
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig312 1627 0.0
>3x_Contig312
Length = 1457
Score = 1627 bits (817), Expect = 0.0
Identities = 879/896 (98%), Gaps = 7/896 (0%)
Strand = Plus / Plus
Query: 1 gatcatgtcaactttaagaagcgtatgtgataaagttctagaagatgagaccgccgagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcatgtcaactttaagaagcgtatgtgataaagttctagaagatgagaccgccgagat 379
Query: 61 gtcaacaaggataagaagagctgaggctttgaaaagacttgggaaagttttcagaagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtcaacaaggataagaagagctgaggctttgaaaagacttgggaaagttttcagaagggc 439
Query: 121 ataccggacgaaaacagaacaagaggatgcccaagatgtttgaagagctcgtggcggaag 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 440 ataccggacgaaaacagaacaagaggatgcccaag-tgtttgaagagctcgtggcggaag 498
Query: 181 caagcaagaaaaagggtcataagcatcacactagcagcactgccaataaacagtgaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caagcaagaaaaagggtcataagcatcacactagcagcactgccaataaacagtgaatac 558
Query: 241 aaaatattctcaaaccgagtgcttactacctaataatagcataaacacttgccaattctt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaatattctcaaaccgagtgcttcctacctaataatagcataaacacttgccaattctt 618
Query: 301 gttttttcattctttatttctgcatcatgttcatatatacatacatagcttgctacttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gttttttcattctttatttctgcatcatgttcatatatacatacatagcttgctacttaa 678
Query: 361 ttgacaataatattaatttaacatagcgataaactttcagactacgcaaccgaatattgc 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 679 ttgacaataatattaatttaacatagcgataaactttc-gactacgcaaccgaatattgc 737
Query: 421 aactcctgacgatcaacgggggagggctgttaattacaaatattgtttaagaattgctct 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 738 aactcctgacgatcaacgggggagggctgtaaattacaaatattgtttaagaattgctct 797
Query: 481 acgtactgawtgagacwragcagcaggttttccctcctttatgatcttagaagaaacaag 540
|||| |||| |||||| ||||||||||||||||||||||||| |||| |||||||||
Sbjct: 798 acgttctgattgagactgagcagcaggttttccctcctttatg-tcttg--agaaacaag 854
Query: 541 gtcatcggcttcgatagacttttctatatatgtgatcaacttatctaagtcgacggcggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gtcatcggcttcgatagacttttctatatatgtgatcaacttatctaagtcgacggcggc 914
Query: 601 agttgagaatacgaaccattccatgatcatcacaataccaaataatcgccgggattaatt 660
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 915 agttg-gaatacgaaccattccatgatcatcaca-taccaaataatcgccgggattaatt 972
Query: 661 gtctccgtagtgccatcgctaatcttaatcttcaactcacagttatacgaaatcggtttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gtctccgtagtgccatcgctaatcttaatcttcaactcacagttatacgaaatcggtttc 1032
Query: 721 aaaactgcttttggagcacaggtaccgataccgtaactgaaaacgctgtgatccaatgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aaaactgcttttggagcacaggtaccgataccgtaactgaaaacgctgtgatccaatgcc 1092
Query: 781 ttatgctcttcgatatctctgawtctaccaaatacaaccgtaccawggctgcctaaatat 840
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 1093 ttatgctcttcgatatctctgattctaccaaatacaaccgtaccatggctgcctaaatat 1152
Query: 841 tttgctcttgtagacattaatccmccgtacatgccctgaataggtttggtatatgg 896
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1153 tttgctcttgtagacattaatccaccgtacatgccctgaataggtttggtatatgg 1208
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6365
Number of Sequences: 1807
Number of extensions: 6365
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)